Complete Data Download:
The entire YRC PIR has been archived into ten tarred and gzipped files for download. Each .tgz file may be uncompressed on Windows using WinZip, Apple OS X using Stuffit Expander and on Linux using the command line
syntax "tar -xzf full_download_0.tgz".
The files will uncompress in the following format (this example assumes an experiment ID that ends in "123" and an experiment that includes 3 channels and 3 z-sections):
experiments/1/2/3/YRCPIR_ex123/
metadata.txt
images/
YRCPIR_123_p0_z0_c0_t0.ome.tiff
YRCPIR_123_p0_z0_c0_t0.txt
YRCPIR_123_p0_z0_c1_t0.ome.tiff
YRCPIR_123_p0_z0_c1_t0.txt
YRCPIR_123_p0_z0_c2_t0.ome.tiff
YRCPIR_123_p0_z0_c2_t0.txt
YRCPIR_123_p0_z1_c0_t0.ome.tiff
YRCPIR_123_p0_z1_c0_t0.txt
YRCPIR_123_p0_z1_c1_t0.ome.tiff
YRCPIR_123_p0_z1_c1_t0.txt
YRCPIR_123_p0_z1_c2_t0.ome.tiff
YRCPIR_123_p0_z1_c2_t0.txt
YRCPIR_123_p0_z2_c0_t0.ome.tiff
YRCPIR_123_p0_z2_c0_t0.txt
YRCPIR_123_p0_z2_c1_t0.ome.tiff
YRCPIR_123_p0_z2_c1_t0.txt
YRCPIR_123_p0_z2_c2_t0.ome.tiff
YRCPIR_123_p0_z2_c2_t0.txt
File definitions:
- metadata.txt - contains metadata for the experiment. The data are clearly labeled in the text file.
- images/YRCPIR_1_p0_z0_c0_t0.ome.tiff - an OME TIFF containing the image data. The OME-XML contained in the TIFF header contains image metadata. The filename is formatted to as: YRCPIR_EXPERIMENT ID_pPANEL INDEX_zZ-SECTION INDEX_cCHANNEL INDEX_tTIME INDEX.ome.tiff.
- images/YRCPIR_1_p0_z0_c0_t0.txt - contains metadata for the given image. The data are clearly labeled in the text file.
Files: